Deep Learning Meets Chemistry


Code

sPhysNet-MT4: GitHub models_cal models_exp

sPhysNet and PhysNet2: GitHub

Extended Functional Groups2: GitHub

Frag20_prepare2: GitHub

DTNN_7ib1: GitHub Tutorial

A3D-PNAConv3: GitHub


Datasets

Name Size Download
Frag20-solv-678k & FreeSolv-PHYSPROP-14k4 678,916 / 14,339 Download
Frag202 566296 Download
Plati202 20972 Download
CSD202 39816 Download
QM9M1 133885 Download
eMol9_CM1 88234(9959) Download
Plati_CM1 4076(74) Download
Property1 Download
Frag20-Sol-100k3 100000 Download

Reference

1. Predicting Molecular Energy Using Force-Field Optimized Geometries and Atomic Vector Representations Learned from an Improved Deep Tensor Neural Network

2. Dataset Construction to Explore Chemical Space with 3D Geometry and Deep Learning

3. Accurate prediction of aqueous solvation free energies using 3D atomic feature-based graph neural network with transfer learning

4. Multi-task Deep Ensemble Prediction of Molecular Energetics in Solution: From Quantum Mechanics to Experimental Properties